Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: UMAAI2309-22.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GAGTCTTTGAACGCAAGTTGTGCCCGAGGCTATTTGGCCGAGGGCACGCCTGCCTGGGCATCATGCCTCACATCGCTTCGTGCCCCCCGCCTCCCACGGCCACAGCATTGGGAAGTGGCGGCGCGGATGCGGAGATTGACCTCCCATGCCTTGCAGTGCGGTGGGTTGAAATGACGGTCGCTGGACTGGTCGGACACGGCGAATGGTGGACAAACACAAAGGACGCTGAACGCTGTGTACTCGACCCTAAGCCAAAGTGGCGCGTACAAGGAGCCCATGCCGACGAGCGCTCAAGAGCGCCCTCGGACCACGACCCCAGTC
Locus: ITS2
Nucleotides: 321 bp
Sequence Upload Date: 2023-08-01

Sequence: rbcLa

Sequence ID: UMAAI2309-22.rbcLa GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
AAGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTGACTTATTATACTCCTGATTACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCCCCTGAAGAAGCGGGCGCTGCGGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTGTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGGCCGTTGTTGGGGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGTTTCAAAGCCCTACGAGCTCTACGTTTGGAGGATCTGCGAATTCCCCCTGCTTATTCCAAAACTTTCCAAGGCCCGCCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGTCGTCCCCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAACTACGGTAGAGCAGTTTATGAATGTCTA
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2023-06-01

Attribution

Specimen Depository: Universite de Montpellier
Sequencing Center: Centre for Biodiversity Genomics
Photography: Julie Alauzet
Collectors: J. Alauzet
Specimen Identification: Julie Alauzet

Identifiers

Process ID: UMAAI2309-22 Sample ID: UM_ABSR_00081
Record Created: 2022-09-30 Museum ID:
Collection Code: UM-BOL Field ID: UM_ABSR_00081
Deposited In: Universite de Montpellier
Associated Datasets:
Specimen Linkout:
Checksum: 5d56b265219910d047b39a5716522391

Taxonomy

Kingdom: Plantae Subfamily: Asparagoideae
Phylum: Tracheophyta Tribe:
Class: Liliopsida Genus: Asparagus
Order: Asparagales Species: Asparagus acutifolius
Family: Asparagaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: https://www.inaturalist.org/observations/121725929
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction:
Tissue Descriptor: leave fragment Sex:
Brief Note: Life Stage: Adult
Detailed Notes:

Collection

Country/Ocean: France (FR) Collection Date Start: 2022-06-13
Province/State: Occitanie Collection Date End:
Region/County: Herault Coord. Source:
Sector: Montpellier Coord. Accuracy:
Exact Site: CEFE Experimental Field Elevation: 61
Habitat: Non coniferous evergreen forests Elevation Accuracy:
Latitude: 43.638 Depth:
Longitude: 3.863 Depth Accuracy:
Sampling Protocol: Visual sampling
Collectors: J. Alauzet
Collection Note:

Ecology

Realm: Palearctic
Biome: Mediterranean_Forest_Woodlands_&_Scrub_simplify-0.001_buffered-0.018
Ecoregion: Northeast_Spain_and_Southern_France_Mediterranean_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/UMAAI2309-22
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AUMAAI2309-22&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AUMAAI2309-22&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQr1dXT0NDI2sNQ1MrLOyczNLElNAQDP4wtw?length=2

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