Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | YCHAE407-08.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LCO1490 (GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | polyHCO (TAMACTTCWGGGTGACCAAARAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TGAGCAGGACTTCTAGGAACATCCATGAGAATTCTAATTCGTACCGAACTCGGACAACCAGGAACA---TTCCTAGGAAGAGACCAACTCTATAACACAATTGTAACAGCCCATGCCTTCCTAATAATTTTCTTTCTAGTAATACCAATAATGATTGGAGGGTTTGGAAACTGACTTGTTCCCCTAATACTCGGGGCGCCAGACATGGCATTTCCTCGTCTAAATAACATAAGGTTTTGACTACTGCCTCCCTCCCTCACACTGTTAGTTTTTTCAGCCGCAGTGGAAAAAGGAGCCGGCACGGGATGAACAGTATACCCCCCACTATCAAGAAATCTCGCCCATGCCGGACCGTCAGTAGATCTAGCAATTTTTTCTCTCCACCTAGCAGGTGTTTCATCCATTTTAGCATCCTTAAACTTCATTACGACAACAATCAATATACGATCCAAAGGCATACGAATAGAACGAGTTCCCCTATTTGTATGATCTGTTATAATTACAGCTATCCTTCTTCTTCTTTCCCTGCCGGTTTTAGCAGGTGCCATCACCATATTACTGACTGACCGTAACCTAAACACCGCATTCTTTGATCCGGCAGGGGGAGGGGACCCCGTACTATACCAACACCTCTTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 636 bp | ||
| Sequence Upload Date: | 2009-08-26 | ||
Attribution
| Specimen Depository: | El Colegio de la Frontera Sur, Unidad Chetumal |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Yanez-Rivera, B. |
| Specimen Identification: | Beatriz Yanez-Rivera |
Identifiers
| Process ID: | YCHAE407-08 | Sample ID: | ECOSUR-OH-P0384 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | ECOSUR-OH-P0384 | ||||
| Collection Code: | ECOSUR-OH | Field ID: | ||||
| Deposited In: | El Colegio de la Frontera Sur, Unidad Chetumal | |||||
| Associated Datasets: |
DS-CCDBPUB0 | Public release of pre-2010 data produced by the CCDB DS-GAIMARIN | Global Atlantic Iberia Marine Invertebrates with DNA barcodes DS-HACK2019 | Marine hackathon Norway 2019 DS-HACKPOLY | Marine hackathon - Polychaetes DS-MTWA | Worldwide Annelida COI records |
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| Specimen Linkout: | ||||||
| Checksum: | 9393376d853d8bf3eb2fa73feabdee2f | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Annelida | Tribe: | |
| Class: | Polychaeta | Genus: | Hermodice |
| Order: | Amphinomida | Species: | Hermodice carunculata |
| Family: | Amphinomidae | Scientific Name Authorship: | Pallas, 1766 |
| BIN ID: | BOLD:AAB3315 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | Coralline rock | ||
Collection
| Country/Ocean: | Mexico (MX) | Collection Date Start: | 2008-05-02 |
|---|---|---|---|
| Province/State: | Quintana Roo | Collection Date End: | |
| Region/County: | Puerto Morelos | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Las Escolleras beach | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 14.704 | Depth: | |
| Longitude: | -92.407 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Yanez-Rivera, B. | ||
| Collection Note: | |||
Ecology
| Realm: | Neotropic |
|---|---|
| Biome: | |
| Ecoregion: | Central_American_dry_forests, Southern_Mesoamerican_Pacific_mangroves |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/YCHAE407-08 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AYCHAE407-08&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AYCHAE407-08&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYp09nB0NTEw1zWwsM7JzM0sSU0BAMXyCz4=?length=1