Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | YCHAE418-08.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LCO1490 (GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | polyHCO (TAMACTTCWGGGTGACCAAARAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| ATCCATGAGAATTCTAATTCGTACCGAACTCGGACAACCAGGAACA---TTCCTAGGAAGAGACCAACTCTATAACACAATTGTAACAGCCCATGCCTTCCTAATAATTTTCTTTCTAGTAATACCAATAATGATTGGAGGGTTTGGAAACTGACTTGTTCCCCTAATACTCGGAGCGCCAGACATGGCATTTCCTCGTCTAAATAACATAAGGTTTTGACTACTGCCTCCCTCCCTCACACTGTTAGTTTTTTCAGCCGCAGTGGAAAAAGGAGCCGGCACGGGATGAACAGTATACCCCCCACTATCAAGAAATCTCGCCCATGCCGGACCGTCAGTAGATCTAGCAATTTTTTCTCTCCACCTAGCAGGTGTTTCATCCATTTTAGCATCCTTAAACTTCATTACGACAACAATCAATATACGATCCAAAGGCATACGAATAGAACGAGTTCCCCTATTTGTATGATCTGTTATAATTACAGCTATCCTTCTTCTTCTTTCCCTGCCGGTTTTAGCAGGTGCCATCACCATATTACTGACTGACCGTAACCTAAACACCGCATTCTTTGATCCGGCAGGGGGAGGGGACCCCGTACTATACCAACACCTCTTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 616 bp | ||
| Sequence Upload Date: | 2009-08-26 | ||
Attribution
| Specimen Depository: | El Colegio de la Frontera Sur, Unidad Chetumal |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Yanez-Rivera, B. |
| Specimen Identification: | Beatriz Yanez-Rivera |
Identifiers
| Process ID: | YCHAE418-08 | Sample ID: | ECOSUR-OH-P0395 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | ECOSUR-OH-P0395 | ||||
| Collection Code: | ECOSUR-OH | Field ID: | ||||
| Deposited In: | El Colegio de la Frontera Sur, Unidad Chetumal | |||||
| Associated Datasets: |
DS-CCDBPUB0 | Public release of pre-2010 data produced by the CCDB DS-GAIMARIN | Global Atlantic Iberia Marine Invertebrates with DNA barcodes DS-HACK2019 | Marine hackathon Norway 2019 DS-HACKPOLY | Marine hackathon - Polychaetes DS-MTWA | Worldwide Annelida COI records |
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| Specimen Linkout: | ||||||
| Checksum: | 54eae93f3a4cb89be74546c279228a4c | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Annelida | Tribe: | |
| Class: | Polychaeta | Genus: | Hermodice |
| Order: | Amphinomida | Species: | Hermodice carunculata |
| Family: | Amphinomidae | Scientific Name Authorship: | Pallas, 1766 |
| BIN ID: | BOLD:AAB3315 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | Coralline rock | ||
Collection
| Country/Ocean: | Mexico (MX) | Collection Date Start: | 2008-05-08 |
|---|---|---|---|
| Province/State: | Quintana Roo | Collection Date End: | |
| Region/County: | Xcalak | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Xcalak | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 18.256 | Depth: | |
| Longitude: | -87.83 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Yanez-Rivera, B. | ||
| Collection Note: | |||
Ecology
| Realm: | Neotropic |
|---|---|
| Biome: | |
| Ecoregion: | Mesoamerican_Gulf-Caribbean_mangroves |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/YCHAE418-08 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AYCHAE418-08&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AYCHAE418-08&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYp09nB0NTG00DWwsM7JzM0sSU0BAMYLC0A=?length=1