Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | YIOB013-15.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | L6697Bird (TCAACYAACCACAAAGAYATCGGYAC) | Primers Reverse: | H7390Thrush (ACGTGGGARATRATTCCAAATCCTG) |
| Sequence Run Site: | Yamashina Institute for Ornithology | ||
| ACCCTATACCTAATCTTCGGCGCATGAGCTGGTATAGTCGGAACTGCCCTTAGCCTGCTTATTCGAGCAGAACTAGGTCAACCCGGGACCCTCCTAGGAGATGATCAAATCTACAATGTTATTGTCACCGCCCACGCTTTTGTAATAATCTTCTTCATAGTGATGCCAATCATAATTGGTGGCTTCGGAAACTGACTAGTCCCACTTATAATCGGCGCCCCCGACATAGCATTCCCTCGTATAAATAATATAAGCTTCTGACTGCTACCCCCATCATTCCTCCTACTACTGGCATCATCTACAGTAGAAGCCGGAGCAGGCACAGGATGAACAGTATATCCTCCACTTGCTGGTAACCTAGCCCATGCTGGAGCTTCCGTAGACTTAGCTATCTTCTCTCTCCACTTGGCAGGTGTCTCCTCTATTCTAGGTGCTATTAACTTCATCACAACCGCCATTAACATAAAACCTCCAGCCCTCTCCCAATACCAAACACCCCTGTTCGTATGATCAGTACTTATTACCGCCGTCCTACTCTTACTCTCCCTCCCAGTTCTCGCTGCTGGTATTACCATACTACTAACAGACCGAAACCTAAACACTACATTCTTCGATCCTGCCGGAGGAGGAGATCCAGTCCTATACCAACATCTCTTCTGATTCTTCGGCCACCCCGAAGTCTACATCCTAATCTTACCAGGATTTGGA | |||
| Locus: | COI-5P | ||
| Nucleotides: | 708 bp | ||
| Sequence Upload Date: | 2015-08-31 | ||
Attribution
| Specimen Depository: | Yamashina Institute for Ornithology |
|---|---|
| Sequencing Center: | Yamashina Institute for Ornithology |
| Photography: | |
| Collectors: | Y. Shigeta |
| Specimen Identification: | Takema Saitoh |
Identifiers
| Process ID: | YIOB013-15 | Sample ID: | 2001-0224 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2015-08-25 | Museum ID: | YIO-64563 | |||
| Collection Code: | YIO | Field ID: | 2001-0224 | |||
| Deposited In: | Yamashina Institute for Ornithology | |||||
| Associated Datasets: | DS-EBACAVES | Aves for eDNA Detection | |||||
| Specimen Linkout: | ||||||
| Checksum: | 2e202b829722b3038b47bd64ae8fff35 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Aves | Genus: | Calidris |
| Order: | Charadriiformes | Species: | Calidris alba |
| Family: | Scolopacidae | Scientific Name Authorship: | Pallas, 1764 |
| BIN ID: | BOLD:AAB9235 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | F | |
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | Japan (JP) | Collection Date Start: | 2001-09-15 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Chiba | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | ||
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 35.411 | Depth: | |
| Longitude: | 139.915 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Y. Shigeta | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Taiheiyo_evergreen_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/YIOB013-15 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AYIOB013-15&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AYIOB013-15&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYr09HcyMDTWNTS1zsnMzSxJTQEAu7oK_g==?length=1