Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | YIOB092-15.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | L6697Bird (TCAACYAACCACAAAGAYATCGGYAC) | Primers Reverse: | H7390Thrush (ACGTGGGARATRATTCCAAATCCTG) |
| Sequence Run Site: | Yamashina Institute for Ornithology | ||
| GACATCGGTACCCTATACCTAATCTTCGGTGCATGAGCTGGTATAGTTGGAACCGCCCTTAGCCTACTCATTCGCGCAGAACTAGGCCAACCCGGAACCCTCTTAGGAGATGACCAAATTTATAATGTAATTGTCACCGCCCACGCCTTCGTAATAATCTTCTTCATGGTAATGCCAATTATAATTGGTGGTTTCGGAAACTGACTAGTCCCCCTTATAATCGGCGCCCCCGACATAGCATTCCCTCGCATAAATAACATAAGCTTCTGACTTCTTCCCCCATCATTCCTCCTACTACTAGCATCCTCTACAGTAGAAGCTGGAGCAGGTACAGGATGAACAGTATACCCCCCACTCGCTGGTAACCTAGCCCATGCTGGAGCTTCCGTAGACCTAGCTATTTTCTCCCTCCACCTGGCAGGTGTCTCCTCTATTCTAGGTGCTATCAACTTCATCACAACTGCCATCAACATGAAGCCCCCAGCCCTATCTCAATACCAAACACCCCTATTTGTATGATCAGTACTTATTACCGCTGTTCTACTCTTACTTTCCCTTCCAGTCCTTGCCGCTGGCATTACTATACTACTAACAGACCGAAACCTAAACACTACATTCTTCGACCCAGCTGGAGGAGGAGACCCAGTCCTATACCAACACCTCTTCTGATTCTTCGGCCACCCAGAAGTCTACATTCTAATCCTACCAGGATTTGG | |||
| Locus: | COI-5P | ||
| Nucleotides: | 716 bp | ||
| Sequence Upload Date: | 2015-08-31 | ||
Attribution
| Specimen Depository: | Yamashina Institute for Ornithology |
|---|---|
| Sequencing Center: | Yamashina Institute for Ornithology |
| Photography: | |
| Collectors: | Y. Shigeta |
| Specimen Identification: | Takema Saitoh |
Identifiers
| Process ID: | YIOB092-15 | Sample ID: | 2010-1838 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2015-08-25 | Museum ID: | ||||
| Collection Code: | Field ID: | 2010-1838 | ||||
| Deposited In: | Yamashina Institute for Ornithology | |||||
| Associated Datasets: |
DS-EBACAVES | Aves for eDNA Detection DS-IUCNPUB | IUCN Red List Public DNA barcode reference library 2024 |
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| Specimen Linkout: | ||||||
| Checksum: | dc8ad5a3cf2b31a564d5c094ca2199d2 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Aves | Genus: | Calidris |
| Order: | Charadriiformes | Species: | Calidris canutus |
| Family: | Scolopacidae | Scientific Name Authorship: | Linnaeus, 1758 |
| BIN ID: | BOLD:AAB2684 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | Japan (JP) | Collection Date Start: | 2010-09-12 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Chiba | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | ||
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 35.674 | Depth: | |
| Longitude: | 140.005 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Y. Shigeta | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Taiheiyo_evergreen_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/YIOB092-15 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AYIOB092-15&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AYIOB092-15&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYr09HcysDTSNTS1zsnMzSxJTQEAvBYLBQ==?length=1