Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | ZPC1080-20.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| GACTTTGTATTTATTGGCAGGTGCTTGAGCGGGGTTAGTAGGAACTGGACTTAGAATGATTATTCGACTTGAGTTAGGTCAGCCGGGCAGCTTATTGGGTGATGATCAAATTTATAATGTAGTAGTAACTGCTCACGCATTTGTGATAATTTTTTTTATAGTTATACCAATTTTAATTGGGGGATTTGGAAACTGGTTAGTTCCCCTAATACTAGGGTCTCCTGACATAGCTTTTCCTCGAATAAATAATATAAGTTTTTGATTTTTATTGCCCGCTTTAATCTTATTATTGGCTAGGGCTCTAGTAGAATCTGGGGCTGGAACAGGTTGAACGGTGTACCCCCCTTTAAGAAGAAATTTGGCGCACTCTGGTGCCTCTGTTGATTATGCAATTTTTTCATTACATTTGGCCGGAGTATCCTCAATTTTAGGGGCTGTAAATTTCATTAGTACTATAGGTAATTTACGAACTTTTGGAATAACGGGAGACCGTGTACCCCTATTTGCTTGAGCCGTATTAATCACGGCAATCTTACTATTACTATCCCTGCCAGTCCTAGCCGGGGCCATTACAATACTATTAACTGATCGAAATCTTAATACTACTTTTTATGACCCAAGAGGAGGGGGGG | |||
| Locus: | COI-5P | ||
| Nucleotides: | 632 bp | ||
| Sequence Upload Date: | 2020-04-16 | ||
Attribution
| Specimen Depository: | Centre for Biodiversity Genomics |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Peter J. Bryant |
| Collectors: | |
| Specimen Identification: | Lesly Ortiz |
Identifiers
| Process ID: | ZPC1080-20 | Sample ID: | CCDB-24003 C09 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2020-03-18 | Museum ID: | ||||
| Collection Code: | Field ID: | 25 | ||||
| Deposited In: | Centre for Biodiversity Genomics | |||||
| Associated Datasets: | DS-L3GL | Great Lakes DNA barcode Level 3 database | |||||
| Specimen Linkout: | ||||||
| Checksum: | 905c9d935fb1963bc6d129fdea46e14d | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Eucyclopinae |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Copepoda | Genus: | Macrocyclops |
| Order: | Cyclopoida | Species: | Macrocyclops albidus |
| Family: | Cyclopidae | Scientific Name Authorship: | Jurine, 1820 |
| BIN ID: | BOLD:AGC3888 | Subspecies: | |
| Identification Method: | BOLD ID Engine | ||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2018-02-09 |
|---|---|---|---|
| Province/State: | California | Collection Date End: | |
| Region/County: | Orange County | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | San Diego Creek | Elevation: | |
| Habitat: | Freshwater stream | Elevation Accuracy: | |
| Latitude: | 33.667 | Depth: | |
| Longitude: | -117.833 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | |||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | |
| Ecoregion: | California_coastal_sage_and_chaparral |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/ZPC1080-20 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AZPC1080-20&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AZPC1080-20&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYoKcDY0sDDQNTKwzsnMzSxJTQEAupgK6Q==?length=1