Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | ZPC345-15.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACATTGTATTTGTTGGCTGGGGCATGGTCAGGTATAATTGGAACCGGGCTAAGGATAATTATTCGTCTTGAACTAGGTCAAGCAGGA---TCTCTAATCGGTGACGATCAAATTTATAATGTAGTCGTAACCGCTCACGCATTTATTATAATTTTTTTTATAGTTATACCTATTTTAATTGGGGGATTTGGTAACTGGCTTGTTCCTTTAATATTAGGGGCTGCTGATATAGCCTTTCCCCGAATAAATAATATAAGATTTTGATTTTTAATACCTGCTTTGATTATACTTCTTTCAAGATCTCTTGTGGAGAGTGGGGCAGGGACAGGATGAACTGTATACCCCCCTCTTTCAAGAAATATCGCTCATGCAGGGGGGTCTGTTGATTTTGCGATTTTCTCACTACATTTGGCAGGGGTTAGGTCTATTTTAGGAGCCGTAAATTTTATTAGAACTTTAGGGAATCTTCGAGTATTCGGTATACTTTTAGACCGAATACCTTTATTTGCATGAGCGGTTTTGATTACAGCGGTACTATTATTACTATCATTACCGGTTTTAGCTGGAGCTATTACAATATTACTAACCGATCGAAACCTAAACACTTCTTTTTATGACGTGGGAGGGGGGGGTGATCCTATTCTGTACCAGCACTTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 661 bp | ||
| Sequence Upload Date: | 2015-05-05 | ||
Attribution
| Specimen Depository: | Centre for Biodiversity Genomics |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Peter Bryant |
| Collectors: | Peter Bryant |
| Specimen Identification: | Peter Bryant |
Identifiers
| Process ID: | ZPC345-15 | Sample ID: | BIOUG01226-E10 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2015-03-04 | Museum ID: | BIOUG01226-E10 | |||
| Collection Code: | Field ID: | 0005-0018 | ||||
| Deposited In: | Centre for Biodiversity Genomics | |||||
| Associated Datasets: | DS-ZIGB020 | iBOL Records Genbank Submission 020 | |||||
| Specimen Linkout: | ||||||
| Checksum: | e3e30e2e4b41b7ca6e9a53784d03949d | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Copepoda | Genus: | Mecynocera |
| Order: | Calanoida | Species: | Mecynocera clausi |
| Family: | Paracalanidae | Scientific Name Authorship: | I. C. Thompson, 1888 |
| BIN ID: | BOLD:AAK7057 | Subspecies: | |
| Identification Method: | BOLD ID Engine | ||
| Taxonomy Notes: | Wide copepod #2 | ||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | E-Vouchered:DNA/Tissue+Photo | Reproduction: | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | Adult | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2015-01-29 |
|---|---|---|---|
| Province/State: | California | Collection Date End: | |
| Region/County: | Orange County | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Deep Ocean | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 33.55 | Depth: | |
| Longitude: | -117.867 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Peter Bryant | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/ZPC345-15 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AZPC345-15&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AZPC345-15&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsYoKcDY2MdU1NLXOyczNLElNAQCxoArA?length=1